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Skip to main navigation Skip to search Skip to main content Research Profiles at Washington University School of Medicine Home Help & FAQ Home Profiles Departments, Divisions and Centers Research output Search by expertise, name or affiliation View Scopus Profile Gautam Dantas Conan Professorship in Laboratory and Genomic Medicine, Professor of Pathology and Immunology, Co-Division Chief - Division of Laboratory and Genomic Medicine, Professor of Molecular Microbiology, Professor of Pediatrics, Professor of Biomedical Engineering Department of Pathology & ImmunologyRoy and Diana Vagelos Division of Biology & Biomedical Sciences (DBBS)DBBS - Computational and Systems BiologyDBBS - Evolution, Ecology and Population BiologyDBBS - Molecular Genetics and GenomicsDBBS - Molecular Microbiology and Microbial PathogenesisDivision of Laboratory and Genomic MedicineInstitute for Public HealthInstitute of Clinical and Translational Sciences (ICTS)Bursky Center for Human Immunology & Immunotherapy Programs (CHiiPs)Edison Family Center for Genome Sciences & Systems BiologySiteman Cancer Center  https://orcid.org/0000-0003-0455-8370 Willing to MentorAvailable to Mentor:PhD/MSTP Students 15170 Citations 20012024 Research activity per year Overview Fingerprint Network Research output (167) Similar Profiles (12) Personal profile Research interestsDr. Dantas’s research interests and training lie at the interface of microbial genomics, synthetic biology, systems biology, and computational biology. His current research focuses on understanding (1) the evolution and exchange of antibiotic resistance amongst diverse microbial communities, (2) on engineering improved probiotics to treat gastrointestinal disorders, and (3) on engineering microbial catalysts to produce value chemicals such as biofuels. Lab Website MentoringI lead an interdisciplinary research and training group of basic scientists, engineers, and clinicians, spanning formal expertise in microbiology, biochemistry, genomics, pathology, infectious diseases, pediatrics, ecology and evolution, systems biology, biomedical engineering, chemical engineering, and computational biology. In addition to my research efforts, I am deeply committed to education, mentoring, and training. I am the co-Chief of Research for the Division of Laboratory and Genomic Medicine. I am also the co-Director of the Computational & Systems Biology (CSB) graduate program, have served on the steering committee for both the CSB and Molecular Microbiology & Microbial Pathogenesis graduate programs, regularly teach in 3 graduate-level courses, and have served on over 100 qualifying exam and thesis committees. In November 2019, I participated in the “Maximizing Research Mentoring Relationships Workshop” led by an NRMN-trained facilitator, and I will continue to regularly participate in formal mentor training. Over the past 13 years, I have mentored 17 postdoctoral fellows (12 PhD, 4 MD/PhD, 1 MD), 33 graduate students (including 2 MSTP), 2 medical students, 9 research technicians, and over 100 undergraduate interns. I have graduated 17 PhD, 1 MD/PhD, and 1 MSc students; three are independent faculty, six are in post-doctoral training, one is a K-12 teacher, and eight work in biotech. Six of my postdoctoral mentees have earned faculty positions, and four work in the biotech industry. I am committed to providing a nurturing, well-supported, and actively mentored environment for my team to collaboratively tackle basic science and translational research problems.  Available to Mentor:PhD/MSTP Students Fingerprint Dive into the research topics where Gautam Dantas is active. These topic labels come from the works of this person. Together they form a unique fingerprint. 12 Similar Profiles Microbiota Medicine & Life Sciences 100% Microbial Drug Resistance Medicine & Life Sciences 80% Gastrointestinal Microbiome Medicine & Life Sciences 68% Anti-Bacterial Agents Medicine & Life Sciences 65% Metagenomics Medicine & Life Sciences 50% Genes Medicine & Life Sciences 50% Soil Medicine & Life Sciences 28% Bacteria Medicine & Life Sciences 27% View full fingerprint Collaborations and top research areas from the last five years Recent external collaboration on country/territory level. Dive into details by clicking on the dots or Select a country/territory from the list Dive into details Select a country/territory to view shared publications and projects Close Select a country/territory from the list Explore network further Research output Research output per year 2001 2016 2018 2019 2020 2021 2022 2023 2024 131 Article 23 Review article 7 Comment/debate 3 Chapter 3 More 2 Letter 1 Short survey Research output per year Research output per year Conquering homocystinuria with engineered probioticsFishbein, S. R. S., Evbuomwan, E. M. & Dantas, G., Mar 13 2024, In: Cell Host and Microbe. 32, 3, p. 298-300 3 p.Research output: Contribution to journal › Comment/debate homocystinuria 100% Homocystinuria 80% Probiotics 57% probiotics 51% Pyridoxine 36% Genomic surveillance of Clostridioides difficile transmission and virulence in a healthcare settingNewcomer, E. P., Fishbein, S. R. S., Zhang, K., Hink, T., Reske, K. A., Cass, C., Iqbal, Z. H., Struttmann, E. L., Burnham, C. A. D., Dubberke, E. R. & Dantas, G., Mar 2024, In: mBio. 15, 3Research output: Contribution to journal › Article › peer-review Open Access Virulence 100% Delivery of Health Care 69% Infections 47% Whole Genome Sequencing 38% Diarrhea 27% Gut microbiome and antibiotic resistance effects during travelers' diarrhea treatment and preventionBlake, K. S., Schwartz, D. J., Paruthiyil, S., Wang, B., Ning, J., Isidean, S. D., Burns, D. S., Whiteson, H., Lalani, T., Fraser, J. A., Connor, P., Troth, T., Porter, C. K., Tribble, D. R., Riddle, M. S., Gutiérrez, R. L., Simons, M. P. & Dantas, G., Jan 2024, In: mBio. 15, 1Research output: Contribution to journal › Article › peer-review Open Access Microbial Drug Resistance 100% Gastrointestinal Microbiome 98% Diarrhea 82% Rifaximin 55% Microbiota 26% 1 Scopus citations Longitudinal dynamics of farmer and livestock nasal and faecal microbiomes and resistomesMahmud, B., Vargas, R. C., Sukhum, K. V., Patel, S., Liao, J., Hall, L. R., Kesaraju, A., Le, T., Kitchner, T., Kronholm, E., Koshalek, K., Bendixsen, C. G., VanWormer, J. J., Shukla, S. K. & Dantas, G., 2024, (Accepted/In press) In: Nature microbiology.Research output: Contribution to journal › Article › peer-review Livestock 100% Farmers 95% Microbiota 81% Nose 66% Agriculture 27% Sequence-structure-function characterization of the emerging tetracycline destructase family of antibiotic resistance enzymesBlake, K. S., Kumar, H., Loganathan, A., Williford, E. E., Diorio-Toth, L., Xue, Y. P., Tang, W. K., Campbell, T. P., Chong, D. D., Angtuaco, S., Wencewicz, T. A., Tolia, N. H. & Dantas, G., Dec 2024, In: Communications Biology. 7, 1, 336.Research output: Contribution to journal › Article › peer-review Open Access Tetracycline 100% tetracycline 88% Microbial Drug Resistance 88% antibiotic resistance 85% Antimicrobial Agent 61% View all 167 Research outputs Powered by Pure, Scopus & Elsevier Fingerprint Engine™ All content on this site: Copyright © 2024 Elsevier B.V. or its licensors and contributors. All rights are reserved, including those for text and data mining, AI training, and similar technologies. For all open access content, the Creative Commons licensing terms apply We use COOKIEs to help provide and enhance our service and tailor content. By continuing you agree to the use of COOKIEs About web accessibility Report vulnerability